- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component VPS51/UNH of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes
Gene families : OG0004578 (Archaeplastida) Phylogenetic Tree(s): OG0004578_tree ,
OG_05_0005242 (LandPlants) Phylogenetic Tree(s): OG_05_0005242_tree ,
OG_06_0006837 (SeedPlants) Phylogenetic Tree(s): OG_06_0006837_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g079490.2.1 | |
| Cluster | HCCA: Cluster_158 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Mp6g05400.1 | No alias | component VPS51/UNH of GARP/EARP... | 0.03 | Archaeplastida | |
| Pp3c12_23510V3.1 | No alias | Vps51/Vps67 family (components of vesicular transport) protein | 0.02 | Archaeplastida | |
| Zm00001e012075_P003 | No alias | component VPS51/UNH of GARP/EARP... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006528 | asparagine metabolic process | IEP | Neighborhood |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006813 | potassium ion transport | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007051 | spindle organization | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| BP | GO:0016482 | cytosolic transport | IEP | Neighborhood |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Neighborhood |
| BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
| BP | GO:0031023 | microtubule organizing center organization | IEP | Neighborhood |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Neighborhood |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Neighborhood |
| BP | GO:0051225 | spindle assembly | IEP | Neighborhood |
| BP | GO:0070925 | organelle assembly | IEP | Neighborhood |
| BP | GO:0071804 | cellular potassium ion transport | IEP | Neighborhood |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |