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  4. Sequence
  5. Solyc01g079620.4.1

Solyc01g079620.4.1


Description : no hits & (original description: none)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0084957 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079620.4.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00012p00208260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00224850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.05 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.02 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.03 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.03 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.03 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008005001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011872001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013735001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014454001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01015100001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01027182001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
GSVIVT01029904001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035459001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02020 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_09998 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_19333 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22883 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_24641 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_34086 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_34388 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g10350.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_158099g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_21440g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_53373g0010 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_66255g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_69407g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_81763g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_8846750g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp5g19050.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c26_1390V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo80553 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Smo98669 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo99462 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc06g065100.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g076840.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e010251_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e016791_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035233_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!