1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g079920.3.1

Solyc01g079920.3.1


Description : pepsin-type protease


Gene families : OG0000678 (Archaeplastida) Phylogenetic Tree(s): OG0000678_tree ,
OG_05_0000388 (LandPlants) Phylogenetic Tree(s): OG_05_0000388_tree ,
OG_06_0000339 (SeedPlants) Phylogenetic Tree(s): OG_06_0000339_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079920.3.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00080690 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AT1G03230 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
AT5G19100 No alias Eukaryotic aspartyl protease family protein 0.05 Archaeplastida
GSVIVT01011116001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
GSVIVT01017895001 No alias Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
LOC_Os01g71080.1 No alias no description available(sp|q8s1v1|clp_orysj : 664.0) 0.02 Archaeplastida
LOC_Os01g71090.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os01g71160.1 No alias pepsin-type protease 0.04 Archaeplastida
LOC_Os05g33400.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os05g33410.1 No alias pepsin-type protease 0.04 Archaeplastida
LOC_Os05g33420.1 No alias pepsin-type protease 0.04 Archaeplastida
LOC_Os05g33430.1 No alias pepsin-type protease 0.03 Archaeplastida
Smo438360 No alias Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
Solyc01g079940.4.1 No alias pepsin-type protease 0.05 Archaeplastida
Solyc01g079950.3.1 No alias pepsin-type protease 0.07 Archaeplastida
Solyc08g076620.1.1 No alias pepsin-type protease 0.04 Archaeplastida
Zm00001e011394_P001 No alias no description available(sp|q8s1v1|clp_orysj : 254.0) 0.04 Archaeplastida
Zm00001e018704_P001 No alias pepsin-type protease 0.06 Archaeplastida
Zm00001e028358_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR032799 TAXi_C 458 557
IPR032799 TAXi_C 249 410
IPR032861 TAXi_N 42 216
No external refs found!