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  5. AMTR_s00021p00245460

AMTR_s00021p00245460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.265

Description : Protein TSS OS=Arabidopsis thaliana


Gene families : OG0003177 (Archaeplastida) Phylogenetic Tree(s): OG0003177_tree ,
OG_05_0002275 (LandPlants) Phylogenetic Tree(s): OG_05_0002275_tree ,
OG_06_0002087 (SeedPlants) Phylogenetic Tree(s): OG_06_0002087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00245460
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g55230.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 Archaeplastida
LOC_Os07g23990.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 Archaeplastida
Pp3c8_14980V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g095900.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 Archaeplastida
Solyc05g050630.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 Archaeplastida
Solyc07g006030.4.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0030653 beta-lactam antibiotic metabolic process IEP Neighborhood
BP GO:0030654 beta-lactam antibiotic biosynthetic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042316 penicillin metabolic process IEP Neighborhood
BP GO:0042318 penicillin biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0072338 cellular lactam metabolic process IEP Neighborhood
BP GO:0072339 cellular lactam biosynthetic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!