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  5. Solyc01g087170.3.1

Solyc01g087170.3.1


Description : mRNA-binding regulatory factor (TZF)


Gene families : OG0002052 (Archaeplastida) Phylogenetic Tree(s): OG0002052_tree ,
OG_05_0001758 (LandPlants) Phylogenetic Tree(s): OG_05_0001758_tree ,
OG_06_0001743 (SeedPlants) Phylogenetic Tree(s): OG_06_0001743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g087170.3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT5G58620 No alias zinc finger (CCCH-type) family protein 0.04 Archaeplastida
GSVIVT01025263001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.06 Archaeplastida
LOC_Os03g49170.1 No alias mRNA-binding regulatory factor (TZF) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 65 147
No external refs found!