Solyc01g087210.3.1

Description : catalytic component CesA of cellulose synthase complex

Gene families : OG0000303 (Archaeplastida) Phylogenetic Tree(s): OG0000303_tree ,
OG_05_0000193 (LandPlants) Phylogenetic Tree(s): OG_05_0000193_tree ,
OG_06_0000126 (SeedPlants) Phylogenetic Tree(s): OG_06_0000126_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g087210.3.1
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00086120	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
AMTR_s00081p00171100	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	Archaeplastida
AMTR_s00103p00124340	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.08	Archaeplastida
AMTR_s00170p00012630	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.1	Archaeplastida
AT4G32410	AtCESA1, RSW1, CESA1	cellulose synthase 1	0.11	Archaeplastida
AT4G39350	ATH-A, CESA2, ATCESA2	cellulose synthase A2	0.04	Archaeplastida
AT5G05170	IXR1, CEV1,...	Cellulose synthase family protein	0.13	Archaeplastida
AT5G09870	CESA5	cellulose synthase 5	0.02	Archaeplastida
AT5G17420	MUR10, ATCESA7,...	Cellulose synthase family protein	0.09	Archaeplastida
AT5G44030	CESA4, NWS2, IRX5	cellulose synthase A4	0.1	Archaeplastida
AT5G64740	CESA6, PRC1, IXR2, E112	cellulose synthase 6	0.12	Archaeplastida
GSVIVT01013471001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.1	Archaeplastida
GSVIVT01021248001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	Archaeplastida
GSVIVT01023643001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
GSVIVT01023837001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.11	Archaeplastida
GSVIVT01028402001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
GSVIVT01032096001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.13	Archaeplastida
GSVIVT01034552001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.06	Archaeplastida
GSVIVT01035830001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.09	Archaeplastida
Gb_04147	No alias	catalytic component CesA of cellulose synthase complex	0.09	Archaeplastida
Gb_05828	No alias	catalytic component CesA of cellulose synthase complex	0.06	Archaeplastida
Gb_07428	No alias	catalytic component CesA of cellulose synthase complex	0.09	Archaeplastida
Gb_07444	No alias	catalytic component CesA of cellulose synthase complex	0.06	Archaeplastida
Gb_17419	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
Gb_25795	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
Gb_31853	No alias	catalytic component CesA of cellulose synthase complex	0.06	Archaeplastida
Gb_32651	No alias	catalytic component CesA of cellulose synthase complex	0.08	Archaeplastida
LOC_Os01g54620.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
LOC_Os03g59340.1	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
LOC_Os03g62090.1	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
LOC_Os05g08370.1	No alias	catalytic component CesA of cellulose synthase complex	0.12	Archaeplastida
LOC_Os07g10770.1	No alias	catalytic component CesA of cellulose synthase complex	0.11	Archaeplastida
LOC_Os07g14850.1	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
LOC_Os07g24190.1	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
LOC_Os09g25490.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
LOC_Os10g32980.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
MA_102060g0010	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
MA_10341965g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10429177g0010	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
MA_10433465g0030	No alias	Probable cellulose synthase A catalytic subunit 9...	0.05	Archaeplastida
MA_140410g0010	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
MA_174181g0010	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Mp7g07800.1	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
Pp3c15_7150V3.1	No alias	cellulose synthase 1	0.05	Archaeplastida
Pp3c2_13330V3.1	No alias	Cellulose synthase family protein	0.02	Archaeplastida
Pp3c3_34520V3.1	No alias	Cellulose synthase family protein	0.04	Archaeplastida
Pp3c8_7420V3.1	No alias	Cellulose synthase family protein	0.02	Archaeplastida
Pp3c9_2550V3.1	No alias	cellulose synthase 1	0.03	Archaeplastida
Pp3c9_2670V3.1	No alias	Cellulose synthase family protein	0.03	Archaeplastida
Smo141535	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
Smo163575	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.15	Archaeplastida
Smo75715	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
Solyc02g072240.3.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
Solyc07g005840.2.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
Solyc09g072820.4.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
Zm00001e004630_P001	No alias	catalytic component CesA of cellulose synthase complex	0.06	Archaeplastida
Zm00001e006094_P004	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Zm00001e006290_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e009406_P001	No alias	catalytic component CesA of cellulose synthase complex	0.1	Archaeplastida
Zm00001e009570_P001	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Zm00001e009592_P002	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Zm00001e009843_P002	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Zm00001e016747_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e019828_P001	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
Zm00001e026711_P001	No alias	catalytic component CesA of cellulose synthase complex	0.13	Archaeplastida
Zm00001e031187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.11	Archaeplastida
Zm00001e033093_P003	No alias	catalytic component CesA of cellulose synthase complex	0.12	Archaeplastida
Zm00001e033234_P001	No alias	No annotation	0.08	Archaeplastida
Zm00001e033375_P001	No alias	catalytic component CesA of cellulose synthase complex	0.13	Archaeplastida
Zm00001e034187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Neighborhood
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Neighborhood
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005244	voltage-gated ion channel activity	IEP	Neighborhood
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Neighborhood
MF	GO:0005253	anion channel activity	IEP	Neighborhood
MF	GO:0005254	chloride channel activity	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006163	purine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006555	methionine metabolic process	IEP	Neighborhood
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006821	chloride transport	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008172	S-methyltransferase activity	IEP	Neighborhood
MF	GO:0008308	voltage-gated anion channel activity	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008536	Ran GTPase binding	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009086	methionine biosynthetic process	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009259	ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015672	monovalent inorganic cation transport	IEP	Neighborhood
BP	GO:0015689	molybdate ion transport	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
BP	GO:0019693	ribose phosphate metabolic process	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0022832	voltage-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Neighborhood
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Neighborhood
CC	GO:0033180	proton-transporting V-type ATPase, V1 domain	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0046034	ATP metabolic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
MF	GO:0070569	uridylyltransferase activity	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0098655	cation transmembrane transport	IEP	Neighborhood
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Neighborhood
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1902600	proton transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	355	1077
IPR027934	CES_Znf_RING	10	86

External Links

No external refs found!

Solyc01g087210.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation