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  5. Solyc01g088770.3.1

Solyc01g088770.3.1


Description : no hits & (original description: none)


Gene families : OG0010932 (Archaeplastida) Phylogenetic Tree(s): OG0010932_tree ,
OG_05_0011336 (LandPlants) Phylogenetic Tree(s): OG_05_0011336_tree ,
OG_06_0012722 (SeedPlants) Phylogenetic Tree(s): OG_06_0012722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g088770.3.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT1G02160 No alias Cox19 family protein (CHCH motif) 0.05 Archaeplastida
GSVIVT01018320001 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Neighborhood
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0034227 tRNA thio-modification IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051382 kinetochore assembly IEP Neighborhood
BP GO:0051383 kinetochore organization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1905037 autophagosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR010625 CHCH 22 56
No external refs found!