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  5. Solyc01g090530.3.1

Solyc01g090530.3.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0004209 (SeedPlants) Phylogenetic Tree(s): OG_06_0004209_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090530.3.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.04 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.03 Archaeplastida
GSVIVT01015370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035663001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_34388 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c15_19246V3.1 No alias myb domain protein 3r-4 0.02 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e003587_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e016403_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041535_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 62 101
No external refs found!