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  5. Solyc01g090690.4.1

Solyc01g090690.4.1


Description : EF-G translation elongation factor


Gene families : OG0001646 (Archaeplastida) Phylogenetic Tree(s): OG0001646_tree ,
OG_05_0007031 (LandPlants) Phylogenetic Tree(s): OG_05_0007031_tree ,
OG_06_0007471 (SeedPlants) Phylogenetic Tree(s): OG_06_0007471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090690.4.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g36780.1 No alias EF-G translation elongation factor 0.04 Archaeplastida
Mp1g01140.1 No alias EF-G translation elongation factor 0.03 Archaeplastida
Pp3c19_15980V3.1 No alias Translation elongation factor EFG/EF2 protein 0.03 Archaeplastida
Pp3c22_17180V3.1 No alias Translation elongation factor EFG/EF2 protein 0.04 Archaeplastida
Smo141453 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019211 phosphatase activator activity IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 71 344
IPR004161 EFTu-like_2 386 452
No external refs found!