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  5. Solyc01g090730.3.1

Solyc01g090730.3.1


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090730.3.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00022p00198330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AT1G27360 SPL11 squamosa promoter-like 11 0.05 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.05 Archaeplastida
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.03 Archaeplastida
AT3G15270 SPL5 squamosa promoter binding protein-like 5 0.03 Archaeplastida
Cre10.g433350 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
Gb_38013 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_10428252g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_3179g0020 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.04 Archaeplastida
Pp3c16_7480V3.1 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Archaeplastida
Pp3c16_7490V3.1 No alias squamosa promoter binding protein-like 2 0.03 Archaeplastida
Zm00001e006686_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e009093_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e010067_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e013795_P002 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e025110_P001 No alias transcription factor (SBP) 0.07 Archaeplastida
Zm00001e034537_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e041822_P001 No alias transcription factor (SBP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 166 239
No external refs found!