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  5. Solyc01g090950.4.1

Solyc01g090950.4.1


Description : transcription factor (GRAS)


Gene families : OG0002562 (Archaeplastida) Phylogenetic Tree(s): OG0002562_tree ,
OG_05_0001688 (LandPlants) Phylogenetic Tree(s): OG_05_0001688_tree ,
OG_06_0001433 (SeedPlants) Phylogenetic Tree(s): OG_06_0001433_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090950.4.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00228020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
AT3G60630 HAM2, LOM2, ATHAM2 GRAS family transcription factor 0.08 Archaeplastida
LOC_Os10g40390.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
MA_4766093g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002296_P001 No alias transcription factor (GRAS) 0.03 Archaeplastida
Zm00001e007302_P001 No alias transcription factor (GRAS) 0.02 Archaeplastida
Zm00001e015355_P002 No alias transcription factor (GRAS) 0.05 Archaeplastida
Zm00001e023181_P003 No alias transcription factor (GRAS) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 409 768
No external refs found!