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  5. Solyc01g091000.4.1

Solyc01g091000.4.1


Description : transcription factor (PLATZ)


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000880 (LandPlants) Phylogenetic Tree(s): OG_05_0000880_tree ,
OG_06_0001431 (SeedPlants) Phylogenetic Tree(s): OG_06_0001431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g091000.4.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
GSVIVT01004782001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.05 Archaeplastida
GSVIVT01012050001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.05 Archaeplastida
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
GSVIVT01027645001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
Gb_13705 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Gb_29488 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os02g07650.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
MA_14309g0010 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e002426_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e023272_P001 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Zm00001e037743_P001 No alias transcription factor (PLATZ) 0.1 Archaeplastida
Zm00001e041404_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 63 134
No external refs found!