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  5. Solyc01g091010.3.1

Solyc01g091010.3.1


Description : transcription factor (YABBY)


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0006725 (LandPlants) Phylogenetic Tree(s): OG_05_0006725_tree ,
OG_06_0004255 (SeedPlants) Phylogenetic Tree(s): OG_06_0004255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g091010.3.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.06 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.07 Archaeplastida
GSVIVT01012246001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01015567001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01022586001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
Gb_22423 No alias transcription factor (YABBY) 0.02 Archaeplastida
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.08 Archaeplastida
LOC_Os03g11600.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.06 Archaeplastida
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.02 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.02 Archaeplastida
LOC_Os12g42610.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
MA_10432332g0010 No alias transcription factor (YABBY) 0.02 Archaeplastida
MA_407206g0010 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e000845_P005 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.08 Archaeplastida
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.07 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.08 Archaeplastida
Zm00001e012577_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e035310_P003 No alias transcription factor (YABBY) 0.06 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 24 182
No external refs found!