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  5. Solyc01g091270.3.1

Solyc01g091270.3.1


Description : no hits & (original description: none)


Gene families : OG0003017 (Archaeplastida) Phylogenetic Tree(s): OG0003017_tree ,
OG_05_0002245 (LandPlants) Phylogenetic Tree(s): OG_05_0002245_tree ,
OG_06_0002109 (SeedPlants) Phylogenetic Tree(s): OG_06_0002109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g091270.3.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Cre10.g419000 No alias No description available 0.06 Archaeplastida
Gb_12064 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_25365 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g04390.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os08g02460.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Pp3c3_1164V3.1 No alias No annotation 0.04 Archaeplastida
Zm00001e036573_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0010011 auxin binding IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR019376 Myeloid_leukemia_factor 81 233
No external refs found!