Solyc01g091420.2.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000938 (Archaeplastida) Phylogenetic Tree(s): OG0000938_tree ,
OG_05_0000559 (LandPlants) Phylogenetic Tree(s): OG_05_0000559_tree ,
OG_06_0000336 (SeedPlants) Phylogenetic Tree(s): OG_06_0000336_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g091420.2.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT2G42430 LBD16, ASL18 lateral organ boundaries-domain 16 0.02 Archaeplastida
AT2G42440 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
AT2G45410 LBD19 LOB domain-containing protein 19 0.03 Archaeplastida
AT3G03760 LBD20 LOB domain-containing protein 20 0.06 Archaeplastida
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
GSVIVT01027620001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01027621001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01028294001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01029979001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
Gb_14010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_39343 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g56530.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os02g57490.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os03g05500.1 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
LOC_Os03g14270.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os10g07510.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
MA_101817g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_126761g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_8060019g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_962403g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Pp3c11_11230V3.1 No alias LOB domain-containing protein 20 0.03 Archaeplastida
Solyc01g098220.2.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e001031_P001 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
Zm00001e019686_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e038582_P001 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
Zm00001e042348_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 40 138
No external refs found!