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  5. AMTR_s00022p00017150

AMTR_s00022p00017150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.5

No description available


Gene families : OG0002920 (Archaeplastida) Phylogenetic Tree(s): OG0002920_tree ,
OG_05_0004098 (LandPlants) Phylogenetic Tree(s): OG_05_0004098_tree ,
OG_06_0004540 (SeedPlants) Phylogenetic Tree(s): OG_06_0004540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00017150
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AT2G46560 No alias transducin family protein / WD-40 repeat family protein 0.08 Archaeplastida
Cre04.g223000 No alias No description available 0.02 Archaeplastida
GSVIVT01027171001 No alias No description available 0.1 Archaeplastida
LOC_Os01g37120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10437076g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_177408g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_45110g0010 No alias No annotation 0.07 Archaeplastida
Mp1g21310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g096110.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e027708_P001 No alias No annotation 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR022033 Rav1p_C 1007 1495
IPR001680 WD40_repeat 252 295
IPR001680 WD40_repeat 794 836
No external refs found!