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  5. Solyc01g091820.3.1

Solyc01g091820.3.1


Description : Holliday junction resolvase (GEN1)


Gene families : OG0004914 (Archaeplastida) Phylogenetic Tree(s): OG0004914_tree ,
OG_05_0006983 (LandPlants) Phylogenetic Tree(s): OG_05_0006983_tree ,
OG_06_0007939 (SeedPlants) Phylogenetic Tree(s): OG_06_0007939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g091820.3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027599001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.03 Archaeplastida
MA_113806g0010 No alias Flap endonuclease GEN-like 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 129 213
IPR006085 XPG_DNA_repair_N 1 86
No external refs found!