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  5. AMTR_s00022p00025400

AMTR_s00022p00025400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.10

Description : Protein translocation.plasmodesmata intercellular trafficking.SIEL regulator protein


Gene families : OG0004611 (Archaeplastida) Phylogenetic Tree(s): OG0004611_tree ,
OG_05_0003578 (LandPlants) Phylogenetic Tree(s): OG_05_0003578_tree ,
OG_06_0003169 (SeedPlants) Phylogenetic Tree(s): OG_06_0003169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00025400
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030267001 No alias Protein translocation.plasmodesmata intercellular... 0.04 Archaeplastida
Gb_07006 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g090260.5.1.1 No alias component DSP3 of DSP snRNA processing complex. SIEL... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!