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  5. Solyc01g094280.3.1

Solyc01g094280.3.1


Description : bifunctional 5,10-methylene-THF dehydrogenase and 5,10-methenyl-THF cyclohydrolase


Gene families : OG0001317 (Archaeplastida) Phylogenetic Tree(s): OG0001317_tree ,
OG_05_0001265 (LandPlants) Phylogenetic Tree(s): OG_05_0001265_tree ,
OG_06_0001592 (SeedPlants) Phylogenetic Tree(s): OG_06_0001592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g094280.3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AT4G00620 No alias Amino acid dehydrogenase family protein 0.03 Archaeplastida
Cre03.g182450 No alias Coenzyme metabolism.tetrahydrofolate... 0.03 Archaeplastida
Gb_04225 No alias bifunctional 5,10-methylene-THF dehydrogenase and... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR020630 THF_DH/CycHdrlase_cat_dom 79 195
IPR020631 THF_DH/CycHdrlase_NAD-bd_dom 198 363
No external refs found!