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  4. Sequence
  5. Solyc01g094320.3.1

Solyc01g094320.3.1


Description : transcription factor (LIM)


Gene families : OG0000926 (Archaeplastida) Phylogenetic Tree(s): OG0000926_tree ,
OG_05_0107332 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0085029 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g094320.3.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00259550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LIM... 0.03 Archaeplastida
AT1G01780 No alias GATA type zinc finger transcription factor family protein 0.05 Archaeplastida
AT2G39900 No alias GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
AT2G45800 No alias GATA type zinc finger transcription factor family protein 0.05 Archaeplastida
GSVIVT01007812001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.03 Archaeplastida
LOC_Os02g42820.1 No alias transcription factor (LIM) 0.05 Archaeplastida
LOC_Os04g45010.1 No alias transcription factor (LIM) 0.06 Archaeplastida
LOC_Os10g35930.1 No alias transcription factor (LIM) 0.05 Archaeplastida
MA_10428887g0010 No alias transcription factor (LIM) 0.03 Archaeplastida
Solyc03g114000.3.1 No alias transcription factor (LIM) 0.06 Archaeplastida
Solyc05g049870.3.1 No alias transcription factor (LIM) 0.05 Archaeplastida
Zm00001e007423_P001 No alias transcription factor (LIM) 0.03 Archaeplastida
Zm00001e023098_P001 No alias transcription factor (LIM) 0.04 Archaeplastida
Zm00001e041310_P001 No alias transcription factor (LIM) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001781 Znf_LIM 106 161
IPR001781 Znf_LIM 10 65
No external refs found!