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  5. Solyc01g095730.4.1

Solyc01g095730.4.1


Description : no hits & (original description: none)


Gene families : OG0001016 (Archaeplastida) Phylogenetic Tree(s): OG0001016_tree ,
OG_05_0000893 (LandPlants) Phylogenetic Tree(s): OG_05_0000893_tree ,
OG_06_0007310 (SeedPlants) Phylogenetic Tree(s): OG_06_0007310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g095730.4.1
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00184490 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT3G61690 No alias nucleotidyltransferases 0.05 Archaeplastida
Cpa|evm.model.tig00020960.75 No alias No description available 0.01 Archaeplastida
Cre12.g552650 No alias No description available 0.03 Archaeplastida
GSVIVT01028706001 No alias No description available 0.08 Archaeplastida
GSVIVT01030201001 No alias No description available 0.03 Archaeplastida
LOC_Os03g11240.1 No alias no hits & (original description: none) 0.16 Archaeplastida
LOC_Os11g02320.2 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_330312g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_486341g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_18580V3.1 No alias nucleotidyltransferases 0.09 Archaeplastida
Pp3c7_3260V3.1 No alias nucleotidyltransferases 0.06 Archaeplastida
Zm00001e000696_P003 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e023971_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038746_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 76 143
No external refs found!