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  5. Solyc01g095800.3.1

Solyc01g095800.3.1


Description : F-box protein At5g07670 OS=Arabidopsis thaliana (sp|q8vyt5|fb254_arath : 457.0)


Gene families : OG0004346 (Archaeplastida) Phylogenetic Tree(s): OG0004346_tree ,
OG_05_0003179 (LandPlants) Phylogenetic Tree(s): OG_05_0003179_tree ,
OG_06_0005014 (SeedPlants) Phylogenetic Tree(s): OG_06_0005014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g095800.3.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT5G07670 No alias RNI-like superfamily protein 0.02 Archaeplastida
AT5G51380 No alias RNI-like superfamily protein 0.03 Archaeplastida
LOC_Os02g44104.1 No alias F-box protein At5g51380 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 89 120
No external refs found!