1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g095820.2.1

Solyc01g095820.2.1


Description : RING-H2 finger protein ATL22 OS=Arabidopsis thaliana (sp|q9skk8|atl22_arath : 87.4)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000593 (LandPlants) Phylogenetic Tree(s): OG_05_0000593_tree ,
OG_06_0000328 (SeedPlants) Phylogenetic Tree(s): OG_06_0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g095820.2.1

Target Alias Description ECC score Gene Family Method Actions
AT1G49230 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.01 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.05 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Solyc04g014220.1.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 79 122
No external refs found!