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  5. Solyc01g095870.3.1

Solyc01g095870.3.1


Description : Probable F-box protein At3g61730 OS=Arabidopsis thaliana (sp|q9m365|fb331_arath : 408.0)


Gene families : OG0007704 (Archaeplastida) Phylogenetic Tree(s): OG0007704_tree ,
OG_05_0006532 (LandPlants) Phylogenetic Tree(s): OG_05_0006532_tree ,
OG_06_0005844 (SeedPlants) Phylogenetic Tree(s): OG_06_0005844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g095870.3.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027095001 No alias Probable F-box protein At3g61730 OS=Arabidopsis thaliana 0.1 Archaeplastida
GSVIVT01027098001 No alias Probable F-box protein At3g61730 OS=Arabidopsis thaliana 0.04 Archaeplastida
Pp3c6_8570V3.1 No alias No annotation 0.03 Archaeplastida
Zm00001e016447_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!