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  5. Solyc01g095900.4.1

Solyc01g095900.4.1


Description : Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 1263.0)


Gene families : OG0003177 (Archaeplastida) Phylogenetic Tree(s): OG0003177_tree ,
OG_05_0002275 (LandPlants) Phylogenetic Tree(s): OG_05_0002275_tree ,
OG_06_0002087 (SeedPlants) Phylogenetic Tree(s): OG_06_0002087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g095900.4.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00021p00245460 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.11 Archaeplastida
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os07g23990.1 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 Archaeplastida
Pp3c24_6750V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida
Zm00001e033372_P001 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR033646 CLU-central 724 865
IPR028275 CLU_N 46 116
No external refs found!