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  5. Solyc01g096050.4.1

Solyc01g096050.4.1


Description : transcription factor (bHLH)


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0002597 (SeedPlants) Phylogenetic Tree(s): OG_06_0002597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096050.4.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G01260 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.07 Archaeplastida
AT2G46510 AIB, ATAIB ABA-inducible BHLH-type transcription factor 0.11 Archaeplastida
AT4G17880 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.04 Archaeplastida
GSVIVT01027162001 No alias Transcription factor bHLH13 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01027412001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_10001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_36294 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g50940.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os10g42430.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
MA_5838g0020 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc08g005050.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e002421_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e020021_P001 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e037785_P002 No alias transcription factor (bHLH) 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 48 236
IPR011598 bHLH_dom 434 480
No external refs found!