Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0003855 (SeedPlants) Phylogenetic Tree(s): OG_06_0003855_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc01g096070.3.1 | |
Cluster | HCCA: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00267580 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
AMTR_s00092p00072950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
AMTR_s00148p00046020 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.03 | Archaeplastida | |
AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.04 | Archaeplastida | |
GSVIVT01020805001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
GSVIVT01021552001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
LOC_Os01g13520.1 | No alias | transcription factor (ARF) | 0.09 | Archaeplastida | |
LOC_Os01g48060.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os04g56850.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os05g43920.1 | No alias | transcription factor (ARF) | 0.08 | Archaeplastida | |
LOC_Os05g48870.1 | No alias | transcription factor (ARF) | 0.07 | Archaeplastida | |
LOC_Os10g33940.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
MA_10432580g0010 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Pp3c26_11550V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
Zm00001e004554_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e006640_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e012670_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e014833_P002 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Zm00001e030325_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e041866_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
No external refs found! |