Solyc01g096230.4.1

Description : AAA-ATPase At2g46620 OS=Arabidopsis thaliana (sp|f4ij77|aatp4_arath : 515.0)

Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0001286 (SeedPlants) Phylogenetic Tree(s): OG_06_0001286_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g096230.4.1
Cluster	HCCA: Cluster_255

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00241930	evm_27.TU.AmTr_v1...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00019p00244450	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28510 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT3G28520	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT3G28580	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.08	Archaeplastida
GSVIVT01001352001	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032557001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana	0.12	Archaeplastida
LOC_Os01g40140.1	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os01g45450.1	No alias	AAA-ATPase At5g17740 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os07g09420.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os07g33380.1	No alias	AAA-ATPase At5g17760 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_230170g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_344969g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_5260g0010	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.05	Archaeplastida
MA_716242g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e003358_P001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e012527_P001	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e013138_P001	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e033043_P001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	32	117
IPR003959	ATPase_AAA_core	234	352

External Links

No external refs found!

Solyc01g096230.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation