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  5. Solyc01g096320.3.1

Solyc01g096320.3.1


Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096320.3.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.03 Archaeplastida
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.07 Archaeplastida
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.05 Archaeplastida
AT4G40060 ATHB16, HB16, ATHB-16 homeobox protein 16 0.05 Archaeplastida
AT5G15150 ATHB3, HB-3, ATHB-3, HAT7 homeobox 3 0.03 Archaeplastida
GSVIVT01019655001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01020078001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_07209 No alias Homeobox-leucine zipper protein HAT7 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os02g43330.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os09g35910.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
MA_3688g0010 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Pp3c25_13450V3.1 No alias homeobox 1 0.04 Archaeplastida
Pp3c3_37710V3.1 No alias homeobox 3 0.02 Archaeplastida
Zm00001e007381_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e010004_P002 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Zm00001e015274_P001 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Zm00001e022379_P002 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 98 138
IPR001356 Homeobox_dom 45 96
No external refs found!