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  5. Solyc01g096370.4.1

Solyc01g096370.4.1


Description : transcription factor (bHLH)


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0001395 (SeedPlants) Phylogenetic Tree(s): OG_06_0001395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096370.4.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00121p00026620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G01260 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT4G00870 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Gb_04728 No alias no description available(sp|a0a3q7hrz6|myc2_sollc : 189.0) 0.04 Archaeplastida
LOC_Os10g42430.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e002421_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e020021_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 277 323
IPR025610 MYC/MYB_N 27 212
No external refs found!