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  5. Solyc01g096530.3.1

Solyc01g096530.3.1


Description : component BET3 of TRAPP-I/II/III complex-shared components


Gene families : OG0005049 (Archaeplastida) Phylogenetic Tree(s): OG0005049_tree ,
OG_05_0006622 (LandPlants) Phylogenetic Tree(s): OG_05_0006622_tree ,
OG_06_0006491 (SeedPlants) Phylogenetic Tree(s): OG_06_0006491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096530.3.1
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.27 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.02 Archaeplastida
LOC_Os03g28400.1 No alias component BET3 of TRAPP-I/II/III complex-shared components 0.03 Archaeplastida
LOC_Os07g44790.1 No alias component BET3 of TRAPP-I/II/III complex-shared components 0.03 Archaeplastida
MA_10433808g0010 No alias component BET3 of TRAPP-I/II/III complex-shared components 0.03 Archaeplastida
Pp3c6_29730V3.1 No alias Transport protein particle (TRAPP) component 0.05 Archaeplastida
Smo152815 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.03 Archaeplastida
Zm00001e006626_P002 No alias component BET3 of TRAPP-I/II/III complex-shared components 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007194 TRAPP_component 24 170
No external refs found!