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  5. Solyc01g096650.3.1

Solyc01g096650.3.1


Description : Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana (sp|q9fl42|atl69_arath : 108.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000593 (LandPlants) Phylogenetic Tree(s): OG_05_0000593_tree ,
OG_06_0000328 (SeedPlants) Phylogenetic Tree(s): OG_06_0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096650.3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT1G24580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.01 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Cre11.g476250 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Cre16.g651400 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01037651001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Gb_04647 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os02g52210.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g02350.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_71146g0020 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Pp3c20_12240V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Pp3c24_7770V3.1 No alias hypoxia-responsive family protein / zinc finger... 0.03 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Smo39820 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Smo8844 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Smo96631 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g081890.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc04g082690.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc05g010170.2.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 98 142
No external refs found!