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  5. Solyc01g097010.3.1

Solyc01g097010.3.1


Description : Flowering locus K homology domain OS=Arabidopsis thaliana (sp|q9sr13|flk_arath : 326.0)


Gene families : OG0001697 (Archaeplastida) Phylogenetic Tree(s): OG0001697_tree ,
OG_05_0001748 (LandPlants) Phylogenetic Tree(s): OG_05_0001748_tree ,
OG_06_0003559 (SeedPlants) Phylogenetic Tree(s): OG_06_0003559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g097010.3.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00263460 evm_27.TU.AmTr_v1... Flowering locus K homology domain OS=Arabidopsis thaliana 0.07 Archaeplastida
AT3G04610 FLK RNA-binding KH domain-containing protein 0.03 Archaeplastida
GSVIVT01029319001 No alias RNA-binding KH domain-containing protein PEPPER... 0.03 Archaeplastida
Gb_28050 No alias Flowering locus K homology domain OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g42900.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os12g40560.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.05 Archaeplastida
MA_10428218g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.05 Archaeplastida
MA_10431753g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.07 Archaeplastida
Pp3c14_5750V3.1 No alias RNA-binding KH domain-containing protein 0.03 Archaeplastida
Solyc06g084000.4.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e003145_P004 No alias Flowering locus K homology domain OS=Arabidopsis... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 230 293
IPR004088 KH_dom_type_1 47 114
No external refs found!