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Description : R-loop reader protein (ALBA1/2)
Gene families : OG0000764 (Archaeplastida) Phylogenetic Tree(s): OG0000764_tree ,
OG_05_0107353 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0085054 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g097050.4.1 | |
| Cluster | HCCA: Cluster_47 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000383.54 | No alias | Uncharacterized protein At2g34160 OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
| LOC_Os12g30550.1 | No alias | R-loop reader protein (ALBA1/2) | 0.08 | Archaeplastida | |
| MA_144319g0010 | No alias | R-loop reader protein (ALBA1/2) | 0.02 | Archaeplastida | |
| MA_147960g0010 | No alias | R-loop reader protein (ALBA1/2) | 0.02 | Archaeplastida | |
| MA_748541g0010 | No alias | R-loop reader protein (ALBA1/2) | 0.02 | Archaeplastida | |
| Zm00001e039539_P003 | No alias | R-loop reader protein (ALBA1/2) | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006820 | anion transport | IEP | Neighborhood |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Neighborhood |
| BP | GO:0006869 | lipid transport | IEP | Neighborhood |
| BP | GO:0015711 | organic anion transport | IEP | Neighborhood |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Neighborhood |
| BP | GO:0015743 | malate transport | IEP | Neighborhood |
| BP | GO:0015849 | organic acid transport | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| CC | GO:0030118 | clathrin coat | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Neighborhood |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Neighborhood |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| BP | GO:0046942 | carboxylic acid transport | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0061024 | membrane organization | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Neighborhood |
| MF | GO:0120013 | intermembrane lipid transfer activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002775 | DNA/RNA-bd_Alba-like | 39 | 101 |
| No external refs found! |