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  5. Solyc01g097530.3.1

Solyc01g097530.3.1


Description : Photosystem II protein D1 OS=Cuscuta obtusiflora (sp|a8w3h2|psba_cusob : 103.0)


Gene families : OG0001158 (Archaeplastida) Phylogenetic Tree(s): OG0001158_tree ,
OG_05_0000799 (LandPlants) Phylogenetic Tree(s): OG_05_0000799_tree ,
OG_06_0000883 (SeedPlants) Phylogenetic Tree(s): OG_06_0000883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g097530.3.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
ATCG00020 PSBA photosystem II reaction center protein A 0.03 Archaeplastida
Gb_26289 No alias no description available(sp|q85bh5|psba_antag : 489.0) 0.08 Archaeplastida
LOC_Os10g21192.1 No alias component PsbA/D1 of PS-II reaction center complex 0.04 Archaeplastida
LOC_Os10g39880.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.09 Archaeplastida
LOC_Os12g19580.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.04 Archaeplastida
Mp1g09910.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.06 Archaeplastida
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.06 Archaeplastida
Mp5g10950.1 No alias No annotation 0.05 Archaeplastida
Smo236852 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.02 Archaeplastida
Solyc00g500130.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.04 Archaeplastida
Solyc00g500200.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.04 Archaeplastida
Solyc00g500296.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.04 Archaeplastida
Solyc00g500329.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.04 Archaeplastida
Solyc05g016120.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e042113_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.05 Archaeplastida
Zm00001e042176_P001 No alias component PsbA/D1 of PS-II reaction center complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!