Description : transcription factor (GeBP)
Gene families : OG0001559 (Archaeplastida) Phylogenetic Tree(s): OG0001559_tree ,
OG_05_0001004 (LandPlants) Phylogenetic Tree(s): OG_05_0001004_tree ,
OG_06_0000781 (SeedPlants) Phylogenetic Tree(s): OG_06_0000781_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc01g097890.2.1 | |
Cluster | HCCA: Cluster_202 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os03g25430.1 | No alias | transcription factor (GeBP) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007592 | GEBP | 92 | 191 |
No external refs found! |