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  5. Solyc01g098350.3.1

Solyc01g098350.3.1


Description : cyclin (CYCL)


Gene families : OG0000352 (Archaeplastida) Phylogenetic Tree(s): OG0000352_tree ,
OG_05_0003193 (LandPlants) Phylogenetic Tree(s): OG_05_0003193_tree ,
OG_06_0004343 (SeedPlants) Phylogenetic Tree(s): OG_06_0004343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g098350.3.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.112 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.01 Archaeplastida
LOC_Os12g30020.2 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.04 Archaeplastida
MA_101777g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp3g00720.1 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.04 Archaeplastida
Pp3c7_14590V3.1 No alias Cyclin family protein 0.02 Archaeplastida
Zm00001e033489_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e033879_P003 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 12 147
No external refs found!