Solyc01g098720.3.1

Description : transcription factor (bHLH)

Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0000646 (SeedPlants) Phylogenetic Tree(s): OG_06_0000646_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g098720.3.1
Cluster	HCCA: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
AT5G65320	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.09	Archaeplastida
Gb_21105	No alias	transcription factor (bHLH)	0.02	Archaeplastida
LOC_Os02g15760.1	No alias	transcription factor (bHLH)	0.05	Archaeplastida
LOC_Os05g50900.1	No alias	transcription factor (bHLH)	0.03	Archaeplastida
LOC_Os08g37730.1	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Pp3c22_14220V3.1	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.01	Archaeplastida
Solyc05g053660.3.1	No alias	transcription factor (bHLH)	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	123	174

External Links

No external refs found!