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  5. Solyc01g098820.3.1

Solyc01g098820.3.1


Description : Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica (sp|q5ks50|nph3_orysj : 324.0)


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0107377 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0085079 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g098820.3.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.04 Archaeplastida
AMTR_s00065p00211770 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
GSVIVT01000130001 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000146001 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.06 Archaeplastida
GSVIVT01000534001 No alias BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
GSVIVT01003773001 No alias BTB/POZ domain-containing protein At5g66560... 0.03 Archaeplastida
GSVIVT01016261001 No alias BTB/POZ domain-containing protein At5g03250... 0.02 Archaeplastida
GSVIVT01017210001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01021598001 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
GSVIVT01025693001 No alias BTB/POZ domain-containing protein At5g03250... 0.04 Archaeplastida
GSVIVT01027413001 No alias BTB/POZ domain-containing protein At5g17580... 0.04 Archaeplastida
GSVIVT01029878001 No alias BTB/POZ domain-containing protein At3g08570... 0.02 Archaeplastida
GSVIVT01030043001 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
GSVIVT01037852001 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00052 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_07556 No alias BTB/POZ domain-containing protein At1g30440... 0.06 Archaeplastida
Gb_31331 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
Gb_34273 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida
Gb_41063 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os03g10800.2 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g52880.1 No alias BTB/POZ domain-containing protein At5g66560... 0.07 Archaeplastida
LOC_Os04g57800.1 No alias component BPH1 of CUL3-BTB E3 ubiquitin ligase complex 0.04 Archaeplastida
LOC_Os05g08530.1 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g08550.1 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os11g02610.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g41910.2 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Archaeplastida
MA_10430653g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
MA_135496g0010 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_52004g0010 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.06 Archaeplastida
MA_90165g0010 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Pp3c12_21560V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c27_6760V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Pp3c3_37660V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c6_12160V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Smo156140 No alias BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
Solyc09g048980.4.1 No alias BTB/POZ domain-containing protein At3g08570... 0.05 Archaeplastida
Solyc10g047530.2.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
Zm00001e000726_P002 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e014883_P001 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
Zm00001e036310_P001 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e038209_P001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 Archaeplastida
Zm00001e039269_P001 No alias BTB/POZ domain-containing protein At3g08570... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 46 134
IPR027356 NPH3_dom 223 456
No external refs found!