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  5. Solyc01g099320.4.1

Solyc01g099320.4.1


Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0019474 (LandPlants) Phylogenetic Tree(s): OG_05_0019474_tree ,
OG_06_0015211 (SeedPlants) Phylogenetic Tree(s): OG_06_0015211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g099320.4.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00202310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.05 Archaeplastida
AT2G47810 NF-YB5 nuclear factor Y, subunit B5 0.03 Archaeplastida
GSVIVT01014689001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
Solyc04g054150.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g074760.1.1 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e010728_P001 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e015700_P001 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Zm00001e021676_P001 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida
Zm00001e036848_P001 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 9 72
No external refs found!