AMTR_s00022p00086120 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.66

Description : Cell wall.cellulose.synthesis.cellulose synthase complex (CSC).CSC components.CesA-type catalytic component

Gene families : OG0000303 (Archaeplastida) Phylogenetic Tree(s): OG0000303_tree ,
OG_05_0000193 (LandPlants) Phylogenetic Tree(s): OG_05_0000193_tree ,
OG_06_0000126 (SeedPlants) Phylogenetic Tree(s): OG_06_0000126_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00022p00086120
Cluster	HCCA: Cluster_240

Target	Alias	Description	ECC score	Gene Family Method
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.02	Archaeplastida
AT4G32410	AtCESA1, RSW1, CESA1	cellulose synthase 1	0.03	Archaeplastida
AT5G17420	MUR10, ATCESA7,...	Cellulose synthase family protein	0.02	Archaeplastida
AT5G44030	CESA4, NWS2, IRX5	cellulose synthase A4	0.02	Archaeplastida
GSVIVT01021248001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
GSVIVT01023643001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
GSVIVT01028402001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
Gb_07428	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Gb_07444	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Gb_17419	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Gb_31853	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Gb_32651	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
LOC_Os01g54620.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
LOC_Os03g59340.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
LOC_Os03g62090.1	No alias	catalytic component CesA of cellulose synthase complex	0.07	Archaeplastida
LOC_Os05g08370.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
LOC_Os07g10770.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
LOC_Os07g24190.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
MA_10429177g0010	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
MA_10433465g0030	No alias	Probable cellulose synthase A catalytic subunit 9...	0.02	Archaeplastida
MA_140410g0010	No alias	catalytic component CesA of cellulose synthase complex	0.06	Archaeplastida
Mp7g07800.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Pp3c15_7150V3.1	No alias	cellulose synthase 1	0.03	Archaeplastida
Pp3c1_22600V3.1	No alias	Cellulose synthase family protein	0.02	Archaeplastida
Pp3c3_34520V3.1	No alias	Cellulose synthase family protein	0.03	Archaeplastida
Pp3c9_2550V3.1	No alias	cellulose synthase 1	0.02	Archaeplastida
Smo141535	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
Smo163575	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.06	Archaeplastida
Solyc01g087210.3.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Solyc08g061100.3.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e004630_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e006290_P001	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Zm00001e009406_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e009570_P001	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Zm00001e009843_P002	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e019828_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e026711_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e031187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e033093_P003	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e033375_P001	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Zm00001e034187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003840	obsolete gamma-glutamyltransferase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
MF	GO:0004806	triglyceride lipase activity	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006749	glutathione metabolic process	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009581	detection of external stimulus	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009584	detection of visible light	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
BP	GO:0018298	protein-chromophore linkage	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0051606	detection of stimulus	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	361	1087

External Links

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AMTR_s00022p00086120 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation