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  5. Solyc01g099990.3.1

Solyc01g099990.3.1


Description : F-box protein PP2-B15 OS=Arabidopsis thaliana (sp|o80494|p2b15_arath : 231.0)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g099990.3.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.02 Archaeplastida
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.03 Archaeplastida
GSVIVT01019353001 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g56820.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os04g21130.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g05480.1 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_227118g0010 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g056680.2.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 52
IPR025886 PP2-like 101 286
No external refs found!