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  5. Solyc01g100520.3.1

Solyc01g100520.3.1


Description : proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex


Gene families : OG0001597 (Archaeplastida) Phylogenetic Tree(s): OG0001597_tree ,
OG_05_0006556 (LandPlants) Phylogenetic Tree(s): OG_05_0006556_tree ,
OG_06_0007902 (SeedPlants) Phylogenetic Tree(s): OG_06_0007902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100520.3.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT1G02560 NCLPP1, CLPP5, NCLPP5 nuclear encoded CLP protease 5 0.04 Archaeplastida
Cpa|evm.model.tig00021522.2 No alias ATP-dependent Clp protease proteolytic subunit 5,... 0.05 Archaeplastida
Cre12.g486100 No alias Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
GSVIVT01028130001 No alias Protein degradation.peptidase families.serine-type... 0.06 Archaeplastida
Gb_02667 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.02 Archaeplastida
LOC_Os02g42290.3 No alias ATP-dependent Clp protease proteolytic subunit 2,... 0.05 Archaeplastida
LOC_Os03g19510.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.04 Archaeplastida
Mp2g19280.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 Archaeplastida
Pp3c23_19030V3.1 No alias nuclear encoded CLP protease 5 0.02 Archaeplastida
Pp3c24_11660V3.1 No alias nuclear encoded CLP protease 5 0.04 Archaeplastida
Zm00001e038326_P005 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 106 284
No external refs found!