Solyc01g100620.3.1

Description : no hits & (original description: none)

Gene families : OG0000729 (Archaeplastida) Phylogenetic Tree(s): OG0000729_tree ,
OG_05_0107391 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0085098 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g100620.3.1
Cluster	HCCA: Cluster_192

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_84030g0010	No alias	High mobility group B protein 15 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_9504078g0010	No alias	High mobility group B protein 15 OS=Arabidopsis thaliana...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
CC	GO:0005811	lipid droplet	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001606	ARID_dom	55	138
IPR009071	HMG_box_dom	238	306

External Links

No external refs found!

Solyc01g100620.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation