Solyc01g100840.3.1


Description : component TRS23 of TRAPP-I/II/III complex-shared components


Gene families : OG0004352 (Archaeplastida) Phylogenetic Tree(s): OG0004352_tree ,
OG_05_0005738 (LandPlants) Phylogenetic Tree(s): OG_05_0005738_tree ,
OG_06_0007922 (SeedPlants) Phylogenetic Tree(s): OG_06_0007922_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100840.3.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
Cre02.g077500 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.03 Archaeplastida
LOC_Os06g05804.3 No alias component TRS23 of TRAPP-I/II/III complex-shared components 0.04 Archaeplastida
LOC_Os07g27150.1 No alias component TRS23 of TRAPP-I/II/III complex-shared components 0.04 Archaeplastida
MA_10433849g0020 No alias component TRS23 of TRAPP-I/II/III complex-shared components 0.07 Archaeplastida
Mp2g02240.1 No alias component TRS23 of TRAPP-I/II/III complex-shared components 0.02 Archaeplastida
Pp3c15_20530V3.1 No alias SNARE-like superfamily protein 0.03 Archaeplastida
Zm00001e036493_P001 No alias component TRS23 of TRAPP-I/II/III complex-shared components 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030008 TRAPP complex IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0045048 protein insertion into ER membrane IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0072546 ER membrane protein complex IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007233 TRAPPC 4 133
No external refs found!