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  5. Solyc01g100850.3.1

Solyc01g100850.3.1


Description : ABC transporter I family member 20 OS=Arabidopsis thaliana (sp|q9lz98|ab20i_arath : 478.0)


Gene families : OG0002469 (Archaeplastida) Phylogenetic Tree(s): OG0002469_tree ,
OG_05_0002506 (LandPlants) Phylogenetic Tree(s): OG_05_0002506_tree ,
OG_06_0003233 (SeedPlants) Phylogenetic Tree(s): OG_06_0003233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100850.3.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT5G02270 ATNAP9, NAP9 non-intrinsic ABC protein 9 0.06 Archaeplastida
Cre13.g580300 No alias ABC transporter I family member 19 OS=Arabidopsis thaliana 0.06 Archaeplastida
Cre17.g731050 No alias ABC transporter I family member 20 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01028360001 No alias ABC transporter I family member 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
Pp3c27_7710V3.1 No alias non-intrinsic ABC protein 9 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 35 180
No external refs found!