Solyc01g100870.3.1

Description : ARF-GTPase

Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0000536 (SeedPlants) Phylogenetic Tree(s): OG_06_0000536_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g100870.3.1
Cluster	HCCA: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method
AT1G10630	ATARFA1F, ARFA1F	ADP-ribosylation factor A1F	0.04	Archaeplastida
AT2G24765	ATARL1, ARF3, ARL1	ADP-ribosylation factor 3	0.08	Archaeplastida
AT3G03120	ATARFB1C, ARFB1C	ADP-ribosylation factor B1C	0.02	Archaeplastida
Cpa\|evm.model.tig00001093.2	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	Archaeplastida
Cpa\|evm.model.tig00021127.129	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.06	Archaeplastida
Cre12.g535900	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	Archaeplastida
GSVIVT01017654001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	Archaeplastida
GSVIVT01028179001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.08	Archaeplastida
LOC_Os08g15040.1	No alias	ARF-GTPase	0.03	Archaeplastida
MA_7293641g0010	No alias	ADP-ribosylation factor 1 OS=Oryza sativa subsp....	0.02	Archaeplastida
Mp3g13920.1	No alias	ARF-GTPase	0.03	Archaeplastida
Mp7g13050.1	No alias	ARF-GTPase	0.01	Archaeplastida
Pp3c12_14910V3.1	No alias	ADP-ribosylation factor A1E	0.02	Archaeplastida
Solyc01g008000.3.1	No alias	ARF-GTPase	0.04	Archaeplastida
Solyc07g006640.3.1	No alias	ARF-GTPase	0.06	Archaeplastida
Zm00001e002517_P001	No alias	no hits & (original description: none)	0.08	Archaeplastida
Zm00001e009391_P001	No alias	ARF-GTPase	0.03	Archaeplastida
Zm00001e019488_P002	No alias	ARF-GTPase	0.03	Archaeplastida
Zm00001e021566_P001	No alias	ARF-GTPase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	7	154

External Links

No external refs found!