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  5. Solyc01g100990.3.1

Solyc01g100990.3.1


Description : C3H zinc finger transcription factor. protein factor U11/U12-20K of U11/U12 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG0009149 (Archaeplastida) Phylogenetic Tree(s): OG0009149_tree ,
OG_05_0010134 (LandPlants) Phylogenetic Tree(s): OG_05_0010134_tree ,
OG_06_0010731 (SeedPlants) Phylogenetic Tree(s): OG_06_0010731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100990.3.1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g14870.1 No alias C3H zinc finger transcription factor. protein factor... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
InterPro domains Description Start Stop
IPR013085 U1-CZ_Znf_C2H2 5 38
IPR000571 Znf_CCCH 58 80
No external refs found!