Solyc01g101070.3.1

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g101070.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G26910	PDR4, ATPDR4	pleiotropic drug resistance 4	0.04	Archaeplastida
AT3G53480	PIS1, ABCG37,...	pleiotropic drug resistance 9	0.06	Archaeplastida
AT4G15233	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.04	Archaeplastida
AT4G15236	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Cpa\|evm.model.tig00000057.108	No alias	ABC transporter G family member 35 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01017198001	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
GSVIVT01031378001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01034745001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01034746001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01034748001	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Gb_05443	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os02g32690.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os09g16449.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os11g37700.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os12g13720.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_10427561g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_10429038g0010	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_117094g0010	No alias	no description available(sp\|h6ws94\|pdr1_pethy : 134.0)	0.04	Archaeplastida
MA_12781g0010	No alias	ABC transporter G family member 31 OS=Oryza sativa...	0.04	Archaeplastida
MA_38272g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_598099g0010	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Pp3c5_3340V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	Archaeplastida
Smo133564	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo267739	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo429390	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc08g067610.3.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc09g091670.3.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e020667_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e040575_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006099	tricarboxylic acid cycle	IEP	Neighborhood
BP	GO:0006101	citrate metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
MF	GO:0008131	primary amine oxidase activity	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015977	carbon fixation	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0035434	copper ion transmembrane transport	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0048038	quinone binding	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	740	798
IPR013525	ABC_2_trans	524	735
IPR013525	ABC_2_trans	1173	1386
IPR029481	ABC_trans_N	113	163
IPR003439	ABC_transporter-like	875	1026
IPR003439	ABC_transporter-like	189	371

External Links

No external refs found!

Solyc01g101070.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation