1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g101225.1.1

Solyc01g101225.1.1


Description : no hits & (original description: none)


Gene families : OG0000810 (Archaeplastida) Phylogenetic Tree(s): OG0000810_tree ,
OG_05_0000712 (LandPlants) Phylogenetic Tree(s): OG_05_0000712_tree ,
OG_06_0000693 (SeedPlants) Phylogenetic Tree(s): OG_06_0000693_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g101225.1.1
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00262570 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00024p00072290 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00065p00037640 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G05850 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 394 486
IPR000270 PB1_dom 24 89
IPR004332 Transposase_MuDR 198 263
IPR007527 Znf_SWIM 648 677
No external refs found!